Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCGF3Q3KNV8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF3Q3KNV8 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF3Q3KNV8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCGF3Q3KNV8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.58□□□□□ -0.07
PCGF3Q3KNV8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AL645728.1-201ENST00000366221 2101 ntBASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 KRT18P3-201ENST00000451602 1288 ntBASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AC140113.2-201ENST00000604370 208 ntBASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 AC006538.1-201ENST00000567905 1585 ntBASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCGF3Q3KNV8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 FRMD8P1-201ENST00000440433 1524 ntBASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 AC144831.1-201ENST00000573312 2656 ntBASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 MIR940-201ENST00000401276 94 ntBASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 VN2R19P-201ENST00000442399 1052 ntBASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
PCGF3Q3KNV8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms