Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATP1B3P54709 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATP1B3P54709 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.27□□□□□ -0.12
ATP1B3P54709 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.27□□□□□ -0.12
ATP1B3P54709 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
ATP1B3P54709 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.27□□□□□ -0.12
ATP1B3P54709 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.27□□□□□ -0.12
ATP1B3P54709 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.27□□□□□ -0.12
ATP1B3P54709 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATP1B3P54709 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ATP1B3P54709 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 KRT18P27-201ENST00000427733 1299 ntBASIC14.27□□□□□ -0.13
ATP1B3P54709 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.27□□□□□ -0.13
ATP1B3P54709 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 CLEC4GP1-201ENST00000596555 870 ntBASIC14.27□□□□□ -0.13
ATP1B3P54709 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.27□□□□□ -0.13
ATP1B3P54709 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.27□□□□□ -0.13
ATP1B3P54709 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ATP1B3P54709 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ATP1B3P54709 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ATP1B3P54709 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATP1B3P54709 LINC01144-201ENST00000626198 1710 ntBASIC14.27□□□□□ -0.13
ATP1B3P54709 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ATP1B3P54709 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.26□□□□□ -0.13
ATP1B3P54709 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATP1B3P54709 RPS2P28-201ENST00000314255 741 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATP1B3P54709 AC073621.1-201ENST00000392730 636 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.26□□□□□ -0.13
ATP1B3P54709 POU5F1P6-201ENST00000466990 990 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.26□□□□□ -0.13
ATP1B3P54709 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.26□□□□□ -0.13
ATP1B3P54709 RNPS1P1-201ENST00000507437 918 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 AC107918.2-201ENST00000530817 355 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.26□□□□□ -0.13
ATP1B3P54709 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.26□□□□□ -0.13
ATP1B3P54709 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.26□□□□□ -0.13
ATP1B3P54709 AC008667.4-201ENST00000607370 168 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 AC012313.10-201ENST00000623509 926 ntBASIC14.26□□□□□ -0.13
ATP1B3P54709 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ATP1B3P54709 PCGF3-213ENST00000620529 1899 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms