Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF144AP50876 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 REXO1L8P-201ENST00000604378 1897 ntBASIC15.29■□□□□ 0.04
RNF144AP50876 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF144AP50876 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF144AP50876 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF144AP50876 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 ZNF259P1-201ENST00000407656 1365 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF144AP50876 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF144AP50876 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF144AP50876 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF144AP50876 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 POLD2P1-201ENST00000511220 997 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF144AP50876 AC096734.2-201ENST00000562054 433 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF144AP50876 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 AL031055.1-201ENST00000606362 631 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 AL139011.1-202ENST00000642063 584 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 PCGF3-213ENST00000620529 1899 ntBASIC15.28■□□□□ 0.04
RNF144AP50876 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF144AP50876 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF144AP50876 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF144AP50876 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF144AP50876 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
RNF144AP50876 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF144AP50876 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 RNU1-129P-201ENST00000384064 167 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 AL022342.1-201ENST00000400363 863 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RNF144AP50876 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF144AP50876 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF144AP50876 KRT19P2-202ENST00000557173 1012 ntBASIC15.27■□□□□ 0.04
RNF144AP50876 AC106730.1-201ENST00000566722 1090 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms