Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.83■□□□□ 0.44
CASP4P49662 AC027307.2-201ENST00000591252 911 ntBASIC17.83■□□□□ 0.44
CASP4P49662 AC073389.1-201ENST00000595595 795 ntBASIC17.83■□□□□ 0.44
CASP4P49662 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.83■□□□□ 0.44
CASP4P49662 AC026120.1-201ENST00000611536 926 ntBASIC17.83■□□□□ 0.44
CASP4P49662 AC055717.3-201ENST00000622967 595 ntBASIC17.83■□□□□ 0.44
CASP4P49662 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.83■□□□□ 0.44
CASP4P49662 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.83■□□□□ 0.44
CASP4P49662 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CASP4P49662 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
CASP4P49662 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.83■□□□□ 0.44
CASP4P49662 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CASP4P49662 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.82■□□□□ 0.44
CASP4P49662 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 AC007950.2-201ENST00000615045 2347 ntBASIC17.82■□□□□ 0.44
CASP4P49662 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.82■□□□□ 0.44
CASP4P49662 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 SPCS2P4-201ENST00000436160 681 ntBASIC17.82■□□□□ 0.44
CASP4P49662 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.82■□□□□ 0.44
CASP4P49662 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 AC079140.1-201ENST00000508039 487 ntBASIC17.82■□□□□ 0.44
CASP4P49662 YBX1P5-201ENST00000509441 847 ntBASIC17.82■□□□□ 0.44
CASP4P49662 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 LINC01225-203ENST00000563550 1244 ntBASIC17.82■□□□□ 0.44
CASP4P49662 MIR3687-2-201ENST00000577708 61 ntBASIC17.82■□□□□ 0.44
CASP4P49662 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 MIR3687-1-201ENST00000614492 61 ntBASIC17.82■□□□□ 0.44
CASP4P49662 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 PAUPAR-201ENST00000630360 2965 ntBASIC17.82■□□□□ 0.44
CASP4P49662 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.82■□□□□ 0.44
CASP4P49662 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CASP4P49662 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.82■□□□□ 0.44
CASP4P49662 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CASP4P49662 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CASP4P49662 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CASP4P49662 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CASP4P49662 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.81■□□□□ 0.44
CASP4P49662 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.81■□□□□ 0.44
CASP4P49662 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.81■□□□□ 0.44
CASP4P49662 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.81■□□□□ 0.44
CASP4P49662 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.81■□□□□ 0.44
CASP4P49662 SPDYE11-202ENST00000450699 704 ntBASIC17.81■□□□□ 0.44
CASP4P49662 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CASP4P49662 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.81■□□□□ 0.44
CASP4P49662 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.81■□□□□ 0.44
CASP4P49662 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.81■□□□□ 0.44
CASP4P49662 SPDYE9P-201ENST00000570642 692 ntBASIC17.81■□□□□ 0.44
CASP4P49662 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.81■□□□□ 0.44
CASP4P49662 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.81■□□□□ 0.44
CASP4P49662 SPDYE10P-202ENST00000612005 668 ntBASIC17.81■□□□□ 0.44
CASP4P49662 SPDYE8P-202ENST00000612377 668 ntBASIC17.81■□□□□ 0.44
CASP4P49662 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CASP4P49662 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.81■□□□□ 0.44
CASP4P49662 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms