Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 AL691432.1-201ENST00000596308 1422 ntBASIC16.34■□□□□ 0.21
CSNK1DP48730 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.34■□□□□ 0.21
CSNK1DP48730 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CSNK1DP48730 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.34■□□□□ 0.21
CSNK1DP48730 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.34■□□□□ 0.21
CSNK1DP48730 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CSNK1DP48730 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.33■□□□□ 0.21
CSNK1DP48730 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1DP48730 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1DP48730 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.33■□□□□ 0.21
CSNK1DP48730 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1DP48730 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CSNK1DP48730 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.33■□□□□ 0.21
CSNK1DP48730 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1DP48730 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CSNK1DP48730 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1DP48730 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CSNK1DP48730 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1DP48730 AC004987.2-201ENST00000395959 1148 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.33■□□□□ 0.2
CSNK1DP48730 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 DUX4L27-201ENST00000554796 1261 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 AC243562.2-201ENST00000561247 970 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 AC093512.1-201ENST00000617969 520 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 AP001282.1-201ENST00000531301 1499 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CSNK1DP48730 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1DP48730 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1DP48730 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 AL596087.1-201ENST00000400979 1969 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.33■□□□□ 0.2
CSNK1DP48730 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 CETN4P-206ENST00000642099 2168 ntBASIC16.33■□□□□ 0.2
CSNK1DP48730 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1DP48730 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
CSNK1DP48730 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CSNK1DP48730 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1DP48730 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1DP48730 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 AC055876.3-201ENST00000431496 288 ntBASIC16.32■□□□□ 0.2
CSNK1DP48730 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1DP48730 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1DP48730 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1DP48730 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1DP48730 AC138649.4-201ENST00000612222 287 ntBASIC16.32■□□□□ 0.2
CSNK1DP48730 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 AC073592.8-201ENST00000624126 511 ntBASIC16.32■□□□□ 0.2
CSNK1DP48730 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1DP48730 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1DP48730 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1DP48730 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1DP48730 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1DP48730 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.31■□□□□ 0.2
CSNK1DP48730 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms