Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.52■□□□□ 0.87
COL15A1P39059 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COL15A1P39059 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.52■□□□□ 0.87
COL15A1P39059 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.51■□□□□ 0.87
COL15A1P39059 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 CROCCP4-201ENST00000457096 498 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 USP32P1-208ENST00000506594 1164 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 AP005482.1-201ENST00000563722 1273 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 RARRES2P5-201ENST00000564013 466 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 MIR4321-201ENST00000592276 80 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 AC015936.2-201ENST00000593177 259 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 AL391069.4-201ENST00000609583 481 ntBASIC20.51■□□□□ 0.87
COL15A1P39059 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL15A1P39059 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL15A1P39059 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.51■□□□□ 0.87
COL15A1P39059 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.51■□□□□ 0.87
COL15A1P39059 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL15A1P39059 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.51■□□□□ 0.87
COL15A1P39059 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL15A1P39059 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
COL15A1P39059 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.5■□□□□ 0.87
COL15A1P39059 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.5■□□□□ 0.87
COL15A1P39059 AC010319.3-201ENST00000597028 470 ntBASIC20.5■□□□□ 0.87
COL15A1P39059 MIR6775-201ENST00000617557 69 ntBASIC20.5■□□□□ 0.87
COL15A1P39059 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL15A1P39059 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.5■□□□□ 0.87
COL15A1P39059 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.5■□□□□ 0.87
COL15A1P39059 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
COL15A1P39059 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL15A1P39059 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.5■□□□□ 0.87
COL15A1P39059 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL15A1P39059 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC20.5■□□□□ 0.87
COL15A1P39059 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
COL15A1P39059 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.49■□□□□ 0.87
COL15A1P39059 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.49■□□□□ 0.87
COL15A1P39059 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 FO393414.2-201ENST00000405153 598 ntBASIC20.49■□□□□ 0.87
COL15A1P39059 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.49■□□□□ 0.87
COL15A1P39059 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC20.49■□□□□ 0.87
COL15A1P39059 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.49■□□□□ 0.87
COL15A1P39059 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.49■□□□□ 0.87
COL15A1P39059 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.49■□□□□ 0.87
COL15A1P39059 AC133552.6-201ENST00000613406 534 ntBASIC20.49■□□□□ 0.87
COL15A1P39059 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL15A1P39059 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.49■□□□□ 0.87
COL15A1P39059 AL033527.5-201ENST00000641382 801 ntBASIC20.49■□□□□ 0.87
COL15A1P39059 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL15A1P39059 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 AGGF1P2-201ENST00000426656 2106 ntBASIC20.49■□□□□ 0.87
COL15A1P39059 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.49■□□□□ 0.87
COL15A1P39059 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC20.49■□□□□ 0.87
COL15A1P39059 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms