Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.74■□□□□ 0.11
HTR1EP28566 LAGE3P1-201ENST00000425356 484 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 METTL21AP1-201ENST00000438852 635 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 AC009947.1-201ENST00000444350 727 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HTR1EP28566 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR1EP28566 MIR4492-201ENST00000581627 80 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 MIR3197-201ENST00000582241 73 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.74■□□□□ 0.11
HTR1EP28566 AC073592.4-201ENST00000623827 446 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.74■□□□□ 0.11
HTR1EP28566 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 CDC14C-201ENST00000428251 1719 ntBASIC15.74■□□□□ 0.11
HTR1EP28566 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HTR1EP28566 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HTR1EP28566 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HTR1EP28566 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HTR1EP28566 AP006288.1-201ENST00000446065 395 ntBASIC15.73■□□□□ 0.11
HTR1EP28566 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.73■□□□□ 0.11
HTR1EP28566 SNHG9-202ENST00000564014 471 ntBASIC15.73■□□□□ 0.11
HTR1EP28566 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 MIR1199-201ENST00000621445 119 ntBASIC15.73■□□□□ 0.11
HTR1EP28566 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 AC023824.1-201ENST00000562945 2975 ntBASIC15.73■□□□□ 0.11
HTR1EP28566 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HTR1EP28566 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.73■□□□□ 0.11
HTR1EP28566 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.73■□□□□ 0.11
HTR1EP28566 LINC02447-202ENST00000501888 2146 ntBASIC15.73■□□□□ 0.11
HTR1EP28566 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HTR1EP28566 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 AC144831.1-201ENST00000573312 2656 ntBASIC15.72■□□□□ 0.11
HTR1EP28566 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.72■□□□□ 0.11
HTR1EP28566 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.72■□□□□ 0.11
HTR1EP28566 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 REXO1L8P-201ENST00000604378 1897 ntBASIC15.72■□□□□ 0.11
HTR1EP28566 LINC01144-201ENST00000626198 1710 ntBASIC15.72■□□□□ 0.11
HTR1EP28566 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HTR1EP28566 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.72■□□□□ 0.11
HTR1EP28566 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
HTR1EP28566 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.72■□□□□ 0.11
HTR1EP28566 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.72■□□□□ 0.11
HTR1EP28566 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HTR1EP28566 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms