Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.84□□□□□ -0.03
GDF1P27539 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 FO538757.1-201ENST00000623083 1397 ntBASIC14.84□□□□□ -0.03
GDF1P27539 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GDF1P27539 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.83□□□□□ -0.03
GDF1P27539 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.83□□□□□ -0.03
GDF1P27539 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GDF1P27539 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
GDF1P27539 AL589702.1-201ENST00000641229 1509 ntBASIC14.83□□□□□ -0.04
GDF1P27539 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
GDF1P27539 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
GDF1P27539 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 BASP1P1-201ENST00000430708 665 ntBASIC14.83□□□□□ -0.04
GDF1P27539 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.83□□□□□ -0.04
GDF1P27539 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.83□□□□□ -0.04
GDF1P27539 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.83□□□□□ -0.04
GDF1P27539 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GDF1P27539 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
GDF1P27539 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.83□□□□□ -0.04
GDF1P27539 AC005622.1-201ENST00000636801 1703 ntBASIC14.83□□□□□ -0.04
GDF1P27539 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
GDF1P27539 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.83□□□□□ -0.04
GDF1P27539 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GDF1P27539 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 LTB4R2-202ENST00000528054 3092 ntBASIC14.82□□□□□ -0.04
GDF1P27539 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.82□□□□□ -0.04
GDF1P27539 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.82□□□□□ -0.04
GDF1P27539 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GDF1P27539 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.82□□□□□ -0.04
GDF1P27539 AC055876.3-201ENST00000431496 288 ntBASIC14.82□□□□□ -0.04
GDF1P27539 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 MTND6P24-201ENST00000440466 518 ntBASIC14.82□□□□□ -0.04
GDF1P27539 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.82□□□□□ -0.04
GDF1P27539 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 RNA5SP421-201ENST00000516864 134 ntBASIC14.82□□□□□ -0.04
GDF1P27539 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.82□□□□□ -0.04
GDF1P27539 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GDF1P27539 AL158211.3-201ENST00000607385 239 ntBASIC14.82□□□□□ -0.04
GDF1P27539 AC138649.4-201ENST00000612222 287 ntBASIC14.82□□□□□ -0.04
GDF1P27539 AL390754.1-201ENST00000619088 582 ntBASIC14.82□□□□□ -0.04
GDF1P27539 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.82□□□□□ -0.04
GDF1P27539 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GDF1P27539 U82695.1-201ENST00000635752 1889 ntBASIC14.82□□□□□ -0.04
GDF1P27539 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
GDF1P27539 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDF1P27539 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.81□□□□□ -0.04
GDF1P27539 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GDF1P27539 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GDF1P27539 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
GDF1P27539 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.81□□□□□ -0.04
GDF1P27539 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GDF1P27539 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.81□□□□□ -0.04
GDF1P27539 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms