Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.17■□□□□ 0.18
VARSP26640 FAM185BP-201ENST00000443595 716 ntBASIC16.17■□□□□ 0.18
VARSP26640 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.17■□□□□ 0.18
VARSP26640 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
VARSP26640 AC005829.1-201ENST00000570002 483 ntBASIC16.17■□□□□ 0.18
VARSP26640 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 NFIC-211ENST00000641145 8399 ntBASIC16.17■□□□□ 0.18
VARSP26640 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.17■□□□□ 0.18
VARSP26640 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.17■□□□□ 0.18
VARSP26640 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
VARSP26640 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VARSP26640 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.17■□□□□ 0.18
VARSP26640 ME2P1-201ENST00000426028 1970 ntBASIC16.17■□□□□ 0.18
VARSP26640 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.16■□□□□ 0.18
VARSP26640 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.16■□□□□ 0.18
VARSP26640 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 CRYGEP-201ENST00000412192 528 ntBASIC16.16■□□□□ 0.18
VARSP26640 IGLL3P-201ENST00000412472 434 ntBASIC16.16■□□□□ 0.18
VARSP26640 MCCD1P2-201ENST00000423228 335 ntBASIC16.16■□□□□ 0.18
VARSP26640 DNAJB3-202ENST00000449667 1266 ntBASIC16.16■□□□□ 0.18
VARSP26640 CXCL1P1-201ENST00000502804 216 ntBASIC16.16■□□□□ 0.18
VARSP26640 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.16■□□□□ 0.18
VARSP26640 LINC02084-201ENST00000606069 1096 ntBASIC16.16■□□□□ 0.18
VARSP26640 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.16■□□□□ 0.18
VARSP26640 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
VARSP26640 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
VARSP26640 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
VARSP26640 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
VARSP26640 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
VARSP26640 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.15■□□□□ 0.18
VARSP26640 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.15■□□□□ 0.18
VARSP26640 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.15■□□□□ 0.18
VARSP26640 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms