Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.69■□□□□ 0.26
PTPN3P26045 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN3P26045 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN3P26045 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PTPN3P26045 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.68■□□□□ 0.26
PTPN3P26045 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 AL355306.1-201ENST00000415580 579 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 AL138918.1-201ENST00000568306 659 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PTPN3P26045 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 AC007950.2-201ENST00000615045 2347 ntBASIC16.68■□□□□ 0.26
PTPN3P26045 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PTPN3P26045 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PTPN3P26045 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
PTPN3P26045 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
PTPN3P26045 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 AL589702.1-201ENST00000641229 1509 ntBASIC16.67■□□□□ 0.26
PTPN3P26045 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 MIR648-201ENST00000385046 94 ntBASIC16.67■□□□□ 0.26
PTPN3P26045 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN3P26045 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN3P26045 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 AC004832.2-201ENST00000426397 482 ntBASIC16.67■□□□□ 0.26
PTPN3P26045 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.67■□□□□ 0.26
PTPN3P26045 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN3P26045 AL671277.1-201ENST00000429656 993 ntBASIC16.67■□□□□ 0.26
PTPN3P26045 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN3P26045 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.67■□□□□ 0.26
PTPN3P26045 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.67■□□□□ 0.26
PTPN3P26045 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.67■□□□□ 0.26
PTPN3P26045 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
PTPN3P26045 AKAP8P1-201ENST00000434743 1349 ntBASIC16.67■□□□□ 0.26
PTPN3P26045 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PTPN3P26045 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
PTPN3P26045 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTPN3P26045 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.66■□□□□ 0.26
PTPN3P26045 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTPN3P26045 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.66■□□□□ 0.26
PTPN3P26045 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PTPN3P26045 TFAMP1-201ENST00000412727 736 ntBASIC16.66■□□□□ 0.26
PTPN3P26045 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms