Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 AP001282.1-201ENST00000531301 1499 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 PMS2P7-201ENST00000506558 1336 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PRPH2P23942 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.55■□□□□ 0.08
PRPH2P23942 KRT18P2-201ENST00000447938 1258 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 PRYP6-201ENST00000514804 343 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.55■□□□□ 0.08
PRPH2P23942 PDPK2P-202ENST00000562415 1191 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.55■□□□□ 0.08
PRPH2P23942 AC068137.2-201ENST00000605408 478 ntBASIC15.55■□□□□ 0.08
PRPH2P23942 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.55■□□□□ 0.08
PRPH2P23942 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.55■□□□□ 0.08
PRPH2P23942 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.55■□□□□ 0.08
PRPH2P23942 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PRPH2P23942 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.54■□□□□ 0.08
PRPH2P23942 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRPH2P23942 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.54■□□□□ 0.08
PRPH2P23942 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 AC126177.1-201ENST00000547829 2218 ntBASIC15.54■□□□□ 0.08
PRPH2P23942 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.54■□□□□ 0.08
PRPH2P23942 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.54■□□□□ 0.08
PRPH2P23942 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PRPH2P23942 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.54■□□□□ 0.08
PRPH2P23942 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.54■□□□□ 0.08
PRPH2P23942 AC018845.2-201ENST00000568326 409 ntBASIC15.54■□□□□ 0.08
PRPH2P23942 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.54■□□□□ 0.08
PRPH2P23942 AC073389.1-201ENST00000595595 795 ntBASIC15.54■□□□□ 0.08
PRPH2P23942 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.54■□□□□ 0.08
PRPH2P23942 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.54■□□□□ 0.08
PRPH2P23942 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PRPH2P23942 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
PRPH2P23942 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PRPH2P23942 GPX1P2-201ENST00000429271 606 ntBASIC15.53■□□□□ 0.08
PRPH2P23942 AC074386.1-202ENST00000463561 864 ntBASIC15.53■□□□□ 0.08
PRPH2P23942 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.53■□□□□ 0.08
PRPH2P23942 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.53■□□□□ 0.08
PRPH2P23942 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.53■□□□□ 0.08
PRPH2P23942 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.53■□□□□ 0.08
PRPH2P23942 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms