Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 AC087388.1-201ENST00000571370 1112 ntBASIC13.93□□□□□ -0.18
HIST1H1DP16402 MTDHP3-201ENST00000594186 672 ntBASIC13.93□□□□□ -0.18
HIST1H1DP16402 AC092119.3-201ENST00000612618 583 ntBASIC13.93□□□□□ -0.18
HIST1H1DP16402 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 AP000550.4-202ENST00000639755 178 ntBASIC13.93□□□□□ -0.18
HIST1H1DP16402 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.93□□□□□ -0.18
HIST1H1DP16402 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HIST1H1DP16402 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ARMC10P1-201ENST00000313754 855 ntBASIC13.92□□□□□ -0.18
HIST1H1DP16402 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ELK2BP-201ENST00000415014 1224 ntBASIC13.92□□□□□ -0.18
HIST1H1DP16402 ATP5G2P1-201ENST00000433580 426 ntBASIC13.92□□□□□ -0.18
HIST1H1DP16402 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 MTDHP4-201ENST00000600287 670 ntBASIC13.92□□□□□ -0.18
HIST1H1DP16402 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.92□□□□□ -0.18
HIST1H1DP16402 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.92□□□□□ -0.18
HIST1H1DP16402 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HIST1H1DP16402 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms