Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHRM1P11229 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRM1P11229 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 AC013410.2-201ENST00000422627 201 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 AL121578.1-201ENST00000428051 892 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC140658.5-201ENST00000438532 169 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 CICP20-201ENST00000443330 2801 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRM1P11229 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRM1P11229 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRM1P11229 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRM1P11229 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRM1P11229 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC118758.2-201ENST00000614242 2813 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRM1P11229 AC138035.3-201ENST00000622706 2791 ntBASIC17.34■□□□□ 0.37
CHRM1P11229 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRM1P11229 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHRM1P11229 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRM1P11229 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHRM1P11229 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CHRM1P11229 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.33■□□□□ 0.37
CHRM1P11229 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRM1P11229 MIR770-201ENST00000390219 98 ntBASIC17.33■□□□□ 0.36
CHRM1P11229 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRM1P11229 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHRM1P11229 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.33■□□□□ 0.36
CHRM1P11229 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 SPCS2P1-201ENST00000561636 679 ntBASIC17.33■□□□□ 0.36
CHRM1P11229 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC17.33■□□□□ 0.36
CHRM1P11229 AL450472.2-201ENST00000603663 1156 ntBASIC17.33■□□□□ 0.36
CHRM1P11229 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.33■□□□□ 0.36
CHRM1P11229 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC17.33■□□□□ 0.36
CHRM1P11229 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRM1P11229 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHRM1P11229 POM121L4P-202ENST00000427789 1891 ntBASIC17.33■□□□□ 0.36
CHRM1P11229 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CHRM1P11229 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHRM1P11229 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 AC010327.5-201ENST00000586923 3061 ntBASIC17.32■□□□□ 0.36
CHRM1P11229 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHRM1P11229 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRM1P11229 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRM1P11229 AC017099.1-201ENST00000448261 1028 ntBASIC17.32■□□□□ 0.36
CHRM1P11229 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 AC023141.5-201ENST00000458585 616 ntBASIC17.32■□□□□ 0.36
CHRM1P11229 KRT8P48-201ENST00000515599 1220 ntBASIC17.32■□□□□ 0.36
CHRM1P11229 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC17.32■□□□□ 0.36
CHRM1P11229 AC112191.1-201ENST00000523689 701 ntBASIC17.32■□□□□ 0.36
CHRM1P11229 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRM1P11229 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.32■□□□□ 0.36
CHRM1P11229 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHRM1P11229 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHRM1P11229 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms