Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.01□□□□□ -0.33
IFNA1P01562 C2orf69P3-201ENST00000565542 1120 ntBASIC13.01□□□□□ -0.33
IFNA1P01562 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.01□□□□□ -0.33
IFNA1P01562 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
IFNA1P01562 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 AL049757.1-201ENST00000616842 1596 ntBASIC13.01□□□□□ -0.33
IFNA1P01562 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.01□□□□□ -0.33
IFNA1P01562 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IFNA1P01562 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
IFNA1P01562 SNX18-202ENST00000343017 3140 ntBASIC13.01□□□□□ -0.33
IFNA1P01562 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 AC003669.1-201ENST00000334569 611 ntBASIC13□□□□□ -0.33
IFNA1P01562 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 RPS2P55-201ENST00000397318 883 ntBASIC13□□□□□ -0.33
IFNA1P01562 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13□□□□□ -0.33
IFNA1P01562 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13□□□□□ -0.33
IFNA1P01562 DUX4L17-201ENST00000557360 1267 ntBASIC13□□□□□ -0.33
IFNA1P01562 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13□□□□□ -0.33
IFNA1P01562 AC092666.2-201ENST00000613287 246 ntBASIC13□□□□□ -0.33
IFNA1P01562 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 AC136621.1-201ENST00000624017 2304 ntBASIC13□□□□□ -0.33
IFNA1P01562 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IFNA1P01562 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13□□□□□ -0.33
IFNA1P01562 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms