Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.81■□□□□ 0.28
MT-CO1P00395 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.81■□□□□ 0.28
MT-CO1P00395 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.81■□□□□ 0.28
MT-CO1P00395 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.81■□□□□ 0.28
MT-CO1P00395 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MT-CO1P00395 FOXO1B-201ENST00000504678 1527 ntBASIC16.8■□□□□ 0.28
MT-CO1P00395 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.8■□□□□ 0.28
MT-CO1P00395 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.8■□□□□ 0.28
MT-CO1P00395 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.8■□□□□ 0.28
MT-CO1P00395 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.8■□□□□ 0.28
MT-CO1P00395 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.8■□□□□ 0.28
MT-CO1P00395 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 AL645939.2-201ENST00000427340 991 ntBASIC16.8■□□□□ 0.28
MT-CO1P00395 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.8■□□□□ 0.28
MT-CO1P00395 HLA-J-202ENST00000469281 1241 ntBASIC16.8■□□□□ 0.28
MT-CO1P00395 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.8■□□□□ 0.28
MT-CO1P00395 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.8■□□□□ 0.28
MT-CO1P00395 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.8■□□□□ 0.28
MT-CO1P00395 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MT-CO1P00395 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MT-CO1P00395 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.8■□□□□ 0.28
MT-CO1P00395 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MT-CO1P00395 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
MT-CO1P00395 DOC2GP-204ENST00000639052 2548 ntBASIC16.79■□□□□ 0.28
MT-CO1P00395 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MT-CO1P00395 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-CO1P00395 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MT-CO1P00395 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 AC142381.1-201ENST00000426099 345 ntBASIC16.79■□□□□ 0.28
MT-CO1P00395 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.79■□□□□ 0.28
MT-CO1P00395 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.79■□□□□ 0.28
MT-CO1P00395 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.79■□□□□ 0.28
MT-CO1P00395 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.79■□□□□ 0.28
MT-CO1P00395 PRYP6-201ENST00000514804 343 ntBASIC16.79■□□□□ 0.28
MT-CO1P00395 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-CO1P00395 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.79■□□□□ 0.28
MT-CO1P00395 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.79■□□□□ 0.28
MT-CO1P00395 AC073389.1-201ENST00000595595 795 ntBASIC16.79■□□□□ 0.28
MT-CO1P00395 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-CO1P00395 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.79■□□□□ 0.28
MT-CO1P00395 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.79■□□□□ 0.28
MT-CO1P00395 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MT-CO1P00395 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms