Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 MST1L-201ENST00000442552 2185 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 AC006449.5-201ENST00000610658 2098 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 AC073439.1-201ENST00000624121 1774 ntBASIC17.33■□□□□ 0.36
ZBED1O96006 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZBED1O96006 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZBED1O96006 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.33■□□□□ 0.36
ZBED1O96006 AC018695.7-201ENST00000624587 2492 ntBASIC17.32■□□□□ 0.36
ZBED1O96006 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
ZBED1O96006 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 PRYP6-201ENST00000514804 343 ntBASIC17.32■□□□□ 0.36
ZBED1O96006 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 AC093520.2-201ENST00000561830 333 ntBASIC17.32■□□□□ 0.36
ZBED1O96006 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.32■□□□□ 0.36
ZBED1O96006 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 AC027612.4-201ENST00000605371 583 ntBASIC17.32■□□□□ 0.36
ZBED1O96006 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.32■□□□□ 0.36
ZBED1O96006 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZBED1O96006 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ZBED1O96006 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZBED1O96006 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.32■□□□□ 0.36
ZBED1O96006 UXT-AS1-201ENST00000590504 1525 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.31■□□□□ 0.36
ZBED1O96006 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.31■□□□□ 0.36
ZBED1O96006 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZBED1O96006 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.31■□□□□ 0.36
ZBED1O96006 AP000842.3-202ENST00000569238 1080 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 AC073389.1-201ENST00000595595 795 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ZBED1O96006 AC084121.4-201ENST00000641598 221 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 AF228730.8-201ENST00000642140 221 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 AL513477.1-201ENST00000602865 2407 ntBASIC17.31■□□□□ 0.36
ZBED1O96006 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.31■□□□□ 0.36
ZBED1O96006 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms