Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 AL365330.1-201ENST00000607459 531 ntBASIC19.46■□□□□ 0.71
MBD4O95243 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MBD4O95243 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.46■□□□□ 0.71
MBD4O95243 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
MBD4O95243 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MBD4O95243 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MBD4O95243 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD4O95243 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.45■□□□□ 0.7
MBD4O95243 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 BCRP1-201ENST00000444246 691 ntBASIC19.45■□□□□ 0.7
MBD4O95243 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD4O95243 AC027369.6-201ENST00000525520 931 ntBASIC19.45■□□□□ 0.7
MBD4O95243 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.45■□□□□ 0.7
MBD4O95243 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD4O95243 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.45■□□□□ 0.7
MBD4O95243 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.45■□□□□ 0.7
MBD4O95243 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MBD4O95243 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MBD4O95243 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MBD4O95243 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MBD4O95243 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.44■□□□□ 0.7
MBD4O95243 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MBD4O95243 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MBD4O95243 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD4O95243 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD4O95243 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD4O95243 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.44■□□□□ 0.7
MBD4O95243 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD4O95243 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD4O95243 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD4O95243 AC011467.4-201ENST00000594891 528 ntBASIC19.44■□□□□ 0.7
MBD4O95243 AL589739.1-201ENST00000607720 493 ntBASIC19.44■□□□□ 0.7
MBD4O95243 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD4O95243 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MBD4O95243 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MBD4O95243 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD4O95243 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD4O95243 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MBD4O95243 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD4O95243 RPL37AP1-201ENST00000412502 279 ntBASIC19.43■□□□□ 0.7
MBD4O95243 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 BASP1P1-201ENST00000430708 665 ntBASIC19.43■□□□□ 0.7
MBD4O95243 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.43■□□□□ 0.7
MBD4O95243 HLA-V-204ENST00000476601 1289 ntBASIC19.43■□□□□ 0.7
MBD4O95243 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD4O95243 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.43■□□□□ 0.7
MBD4O95243 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD4O95243 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD4O95243 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD4O95243 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD4O95243 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD4O95243 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD4O95243 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 CETN4P-206ENST00000642099 2168 ntBASIC19.43■□□□□ 0.7
MBD4O95243 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms