Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RNF8O76064 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF8O76064 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF8O76064 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF8O76064 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF8O76064 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF8O76064 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF8O76064 AC008741.2-201ENST00000612792 3115 ntBASIC17.28■□□□□ 0.36
RNF8O76064 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
RNF8O76064 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF8O76064 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF8O76064 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.28■□□□□ 0.36
RNF8O76064 AC109635.5-201ENST00000533593 962 ntBASIC17.28■□□□□ 0.36
RNF8O76064 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 AC006449.6-201ENST00000612330 2296 ntBASIC17.28■□□□□ 0.36
RNF8O76064 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
RNF8O76064 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF8O76064 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF8O76064 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RNF8O76064 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 AC140658.5-201ENST00000438532 169 ntBASIC17.27■□□□□ 0.36
RNF8O76064 AL591424.1-201ENST00000442569 1213 ntBASIC17.27■□□□□ 0.36
RNF8O76064 KRT18P2-201ENST00000447938 1258 ntBASIC17.27■□□□□ 0.36
RNF8O76064 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.27■□□□□ 0.36
RNF8O76064 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF8O76064 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 RNA5SP416-201ENST00000516838 111 ntBASIC17.27■□□□□ 0.36
RNF8O76064 KRT19P2-202ENST00000557173 1012 ntBASIC17.27■□□□□ 0.36
RNF8O76064 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF8O76064 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.27■□□□□ 0.36
RNF8O76064 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF8O76064 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.36
RNF8O76064 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF8O76064 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RNF8O76064 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF8O76064 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
RNF8O76064 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF8O76064 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF8O76064 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms