Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SNAI2O43623 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 AC092647.4-201ENST00000457211 535 ntBASIC12.33□□□□□ -0.44
SNAI2O43623 VENTXP7-201ENST00000475503 772 ntBASIC12.33□□□□□ -0.44
SNAI2O43623 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.33□□□□□ -0.44
SNAI2O43623 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.33□□□□□ -0.44
SNAI2O43623 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 PMPCAP1-201ENST00000508114 1576 ntBASIC12.33□□□□□ -0.44
SNAI2O43623 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
SNAI2O43623 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SNAI2O43623 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
SNAI2O43623 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.32□□□□□ -0.44
SNAI2O43623 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 CICP14-201ENST00000629111 2732 ntBASIC12.32□□□□□ -0.44
SNAI2O43623 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 AL020989.1-201ENST00000422979 469 ntBASIC12.32□□□□□ -0.44
SNAI2O43623 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC12.32□□□□□ -0.44
SNAI2O43623 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.32□□□□□ -0.44
SNAI2O43623 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 AL603832.2-201ENST00000566195 2125 ntBASIC12.32□□□□□ -0.44
SNAI2O43623 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SNAI2O43623 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SNAI2O43623 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.32□□□□□ -0.44
SNAI2O43623 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms