Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 AL596087.1-201ENST00000400979 1969 ntBASIC14.97□□□□□ -0.01
RNF13O43567 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF13O43567 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF13O43567 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RNF13O43567 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF13O43567 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF13O43567 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RNF13O43567 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF13O43567 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF13O43567 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 PRSS29P-201ENST00000440800 595 ntBASIC14.96□□□□□ -0.01
RNF13O43567 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.96□□□□□ -0.01
RNF13O43567 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RNF13O43567 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF13O43567 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.96□□□□□ -0.01
RNF13O43567 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.96□□□□□ -0.01
RNF13O43567 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RNF13O43567 OR7E47P-204ENST00000575924 449 ntBASIC14.96□□□□□ -0.01
RNF13O43567 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF13O43567 GGT4P-201ENST00000623672 1708 ntBASIC14.96□□□□□ -0.01
RNF13O43567 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RNF13O43567 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.96□□□□□ -0.01
RNF13O43567 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF13O43567 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RNF13O43567 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
RNF13O43567 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF13O43567 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.96□□□□□ -0.02
RNF13O43567 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RNF13O43567 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF13O43567 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF13O43567 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF13O43567 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.95□□□□□ -0.02
RNF13O43567 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RNF13O43567 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF13O43567 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.95□□□□□ -0.02
RNF13O43567 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RNF13O43567 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF13O43567 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms