Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SMAD6O43541 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMAD6O43541 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.47■□□□□ 0.23
SMAD6O43541 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SMAD6O43541 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMAD6O43541 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD6O43541 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SMAD6O43541 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD6O43541 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.47■□□□□ 0.23
SMAD6O43541 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.47■□□□□ 0.23
SMAD6O43541 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.47■□□□□ 0.23
SMAD6O43541 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.47■□□□□ 0.23
SMAD6O43541 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.47■□□□□ 0.23
SMAD6O43541 AC011467.4-201ENST00000594891 528 ntBASIC16.47■□□□□ 0.23
SMAD6O43541 AL096865.1-201ENST00000606796 927 ntBASIC16.47■□□□□ 0.23
SMAD6O43541 AL589739.1-201ENST00000607720 493 ntBASIC16.47■□□□□ 0.23
SMAD6O43541 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.47■□□□□ 0.23
SMAD6O43541 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SMAD6O43541 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SMAD6O43541 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 AC100757.3-201ENST00000622361 1406 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 AC099398.1-201ENST00000567919 2776 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 AC084018.2-201ENST00000613093 2607 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 RPL37AP1-201ENST00000412502 279 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 BASP1P1-201ENST00000430708 665 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.46■□□□□ 0.23
SMAD6O43541 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 AL365330.1-201ENST00000607459 531 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 AL590560.3-201ENST00000623350 461 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SMAD6O43541 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.46■□□□□ 0.23
SMAD6O43541 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SMAD6O43541 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SMAD6O43541 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD6O43541 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
SMAD6O43541 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.46■□□□□ 0.22
SMAD6O43541 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SMAD6O43541 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.45■□□□□ 0.22
SMAD6O43541 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.45■□□□□ 0.22
SMAD6O43541 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SMAD6O43541 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms