Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.61□□□□□ -0.55
TMEM238C9JI98 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TMEM238C9JI98 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TMEM238C9JI98 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AC006504.5-208ENST00000588784 2401 ntBASIC11.6□□□□□ -0.55
TMEM238C9JI98 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AL391256.1-201ENST00000443260 1855 ntBASIC11.6□□□□□ -0.55
TMEM238C9JI98 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AC104390.1-201ENST00000555663 520 ntBASIC11.6□□□□□ -0.55
TMEM238C9JI98 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SLC25A1P4-201ENST00000567977 778 ntBASIC11.6□□□□□ -0.55
TMEM238C9JI98 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TMEM238C9JI98 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.6□□□□□ -0.55
TMEM238C9JI98 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.59□□□□□ -0.55
TMEM238C9JI98 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
TMEM238C9JI98 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms