Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 AL353135.1-201ENST00000606729 504 ntBASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 MTHFR-217ENST00000641820 1569 ntBASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
DDX49Q9Y6V7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX49Q9Y6V7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
DDX49Q9Y6V7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 AC104640.1-201ENST00000562617 2109 ntBASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 GPR89P-201ENST00000407924 1495 ntBASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 AP002490.2-201ENST00000524791 560 ntBASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.76■□□□□ 0.75
DDX49Q9Y6V7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 MIR4469-201ENST00000583919 79 ntBASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 MTDHP5-201ENST00000598980 586 ntBASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 AC010507.1-201ENST00000633895 436 ntBASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DDX49Q9Y6V7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
DDX49Q9Y6V7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms