Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 RBPMS2P1-201ENST00000437762 623 ntBASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 AC098859.1-201ENST00000502915 1238 ntBASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 AC009093.7-201ENST00000623853 1223 ntBASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 AC124067.4-201ENST00000519691 2379 ntBASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 AC006449.5-201ENST00000610658 2098 ntBASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC4Q9Y5F7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AL139400.1-201ENST00000366220 510 ntBASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 GPS2P2-201ENST00000430745 888 ntBASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC4Q9Y5F7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHGC4Q9Y5F7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 TSEN15P1-201ENST00000423257 515 ntBASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHGC4Q9Y5F7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms