Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AL031731.1-201ENST00000642131 2094 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 SERBP1P5-201ENST00000510079 1181 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC026979.3-201ENST00000607315 403 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AF228730.6-201ENST00000641497 218 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC084121.3-201ENST00000641716 218 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC105233.6-201ENST00000642093 218 ntBASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
CTDP1Q9Y5B0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTDP1Q9Y5B0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTDP1Q9Y5B0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTDP1Q9Y5B0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTDP1Q9Y5B0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CTDP1Q9Y5B0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 AC006538.1-201ENST00000567905 1585 ntBASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTDP1Q9Y5B0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 AL603756.1-201ENST00000606511 2163 ntBASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TSSK5P-201ENST00000423978 907 ntBASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TEX28P1-201ENST00000613479 1221 ntBASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TEX28P2-201ENST00000617764 1221 ntBASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 AL589702.1-201ENST00000641229 1509 ntBASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.88■□□□□ 0.61
CTDP1Q9Y5B0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 RPL37AP1-201ENST00000412502 279 ntBASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 AC005034.1-201ENST00000426657 489 ntBASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms