Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 CICP24-201ENST00000605464 2705 ntBASIC15.56■□□□□ 0.08
AP4S1Q9Y587 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
AP4S1Q9Y587 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AC092919.2-201ENST00000623631 1645 ntBASIC15.55■□□□□ 0.08
AP4S1Q9Y587 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP4S1Q9Y587 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 CICP13-201ENST00000422015 2789 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 PMPCAP1-201ENST00000508114 1576 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 OR2I1P-209ENST00000641730 5365 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 LINC00982-205ENST00000420957 435 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 MIR4492-201ENST00000581627 80 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 AC004817.3-201ENST00000602957 2129 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 AL590326.2-201ENST00000625139 305 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 AC106881.1-201ENST00000605849 3329 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms