Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AC254562.1-201ENST00000417586 456 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 HLA-J-202ENST00000469281 1241 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AC109635.5-201ENST00000533593 962 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AC021097.1-201ENST00000607902 574 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AC016027.1-202ENST00000607927 1699 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 AL136379.1-201ENST00000623471 2642 ntBASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
RPH3AQ9Y2J0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RPH3AQ9Y2J0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 TFAMP1-201ENST00000412727 736 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPDYE11-202ENST00000450699 704 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 AL135744.1-201ENST00000565098 629 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 RARRES2P8-201ENST00000566335 367 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPDYE9P-201ENST00000570642 692 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPDYE10P-202ENST00000612005 668 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPDYE8P-202ENST00000612377 668 ntBASIC15.08■□□□□ 0
RPH3AQ9Y2J0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPH3AQ9Y2J0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPH3AQ9Y2J0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.07■□□□□ 0
RPH3AQ9Y2J0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RPH3AQ9Y2J0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.07■□□□□ 0
RPH3AQ9Y2J0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms