Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 FAM58DP-201ENST00000428076 619 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 CNN2P11-201ENST00000429351 262 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 DNAJB3-202ENST00000449667 1266 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 AL596442.2-201ENST00000610240 980 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 AL691403.2-201ENST00000618460 490 ntBASIC17.45■□□□□ 0.38
CISHQ9NSE2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CISHQ9NSE2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.45■□□□□ 0.38
CISHQ9NSE2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 AC139530.3-201ENST00000620344 690 ntBASIC17.44■□□□□ 0.38
CISHQ9NSE2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 CROCCP1-201ENST00000426910 5675 ntBASIC17.44■□□□□ 0.38
CISHQ9NSE2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CISHQ9NSE2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.44■□□□□ 0.38
CISHQ9NSE2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 KRT18P32-201ENST00000424695 1287 ntBASIC17.43■□□□□ 0.38
CISHQ9NSE2 RPS8P6-201ENST00000426177 609 ntBASIC17.43■□□□□ 0.38
CISHQ9NSE2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 SNHG9-202ENST00000564014 471 ntBASIC17.43■□□□□ 0.38
CISHQ9NSE2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms