Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 AP003680.1-201ENST00000598970 3660 ntBASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 KRT8P39-201ENST00000396270 1433 ntBASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.33■□□□□ 0.04
CTPS2Q9NRF8 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 FDX1P1-201ENST00000449115 551 ntBASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 IGHV3-22-201ENST00000520721 359 ntBASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 AC107918.2-201ENST00000530817 355 ntBASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 MTHFR-217ENST00000641820 1569 ntBASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CTPS2Q9NRF8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 AC024909.3-201ENST00000611513 2257 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 RNA5SP415-201ENST00000517246 115 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 OR7E47P-204ENST00000575924 449 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 MIR4751-201ENST00000578027 74 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PRAL-201ENST00000624952 3286 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 REXO1L8P-201ENST00000604378 1897 ntBASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS2Q9NRF8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms