Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 SPCS2P4-201ENST00000436160 681 ntBASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 MIR3908-201ENST00000579798 126 ntBASIC15.52■□□□□ 0.08
PRDM9Q9NQV7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 AL592424.1-201ENST00000563624 1536 ntBASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PRDM9Q9NQV7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AC005237.2-201ENST00000434368 219 ntBASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 COA4-204ENST00000541455 1038 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 AC027307.2-201ENST00000591252 911 ntBASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRDM9Q9NQV7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms