Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 HCG4-201ENST00000418983 998 ntBASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 KRT18P3-201ENST00000451602 1288 ntBASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC064836.3-201ENST00000607928 673 ntBASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 AC063926.3-201ENST00000624734 5658 ntBASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLK4Q9HAZ1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 MED15P5-201ENST00000423150 992 ntBASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 AC107918.2-201ENST00000530817 355 ntBASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 AL645728.2-201ENST00000641974 660 ntBASIC16.02■□□□□ 0.16
CLK4Q9HAZ1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLK4Q9HAZ1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLK4Q9HAZ1 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.02■□□□□ 0.15
CLK4Q9HAZ1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CLK4Q9HAZ1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLK4Q9HAZ1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 AC140113.2-201ENST00000604370 208 ntBASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 AP001350.2-201ENST00000625104 1094 ntBASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLK4Q9HAZ1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CLK4Q9HAZ1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CLK4Q9HAZ1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms