Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 HAUS4P1-201ENST00000406739 1145 ntBASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 AC148477.8-201ENST00000624298 468 ntBASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 LINC00554-201ENST00000564841 3011 ntBASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM38AQ9H6F2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 VN2R19P-201ENST00000442399 1052 ntBASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AC092910.1-201ENST00000482027 1129 ntBASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 KRT18P56-201ENST00000507275 550 ntBASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AL365330.1-201ENST00000607459 531 ntBASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM38AQ9H6F2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM38AQ9H6F2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms