Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 TOP3BP1-201ENST00000420768 1380 ntBASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLIRPQ9GZT3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 AD001527.2-201ENST00000622994 785 ntBASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLIRPQ9GZT3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AP003071.4-201ENST00000562276 1284 ntBASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 TERC-201ENST00000602385 541 ntBASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AP000525.1-201ENST00000608286 694 ntBASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AL359736.2-201ENST00000621992 437 ntBASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 AC140479.7-201ENST00000636301 2332 ntBASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SLIRPQ9GZT3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms