Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 GGT4P-201ENST00000623672 1708 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 AC104581.4-201ENST00000623126 3052 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 LINC00895-201ENST00000629028 1637 ntBASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SSBP4Q9BWG4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC023908.3-201ENST00000564211 3047 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 ARL4AP4-201ENST00000434170 518 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 HOMER2P1-201ENST00000455653 964 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC010203.1-204ENST00000548782 407 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 HYMAI.1-201ENST00000620949 238 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 AC073912.3-201ENST00000624414 853 ntBASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.46□□□□□ -0.41
SSBP4Q9BWG4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 AC106881.1-201ENST00000605849 3329 ntBASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 AC132938.5-201ENST00000624980 1813 ntBASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SSBP4Q9BWG4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP4Q9BWG4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms