Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 AP002414.2-201ENST00000591780 3365 ntBASIC14.13□□□□□ -0.15
NICN1Q9BSH3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NICN1Q9BSH3 PI4KAP1-204ENST00000612579 1703 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 LINC01144-201ENST00000626198 1710 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AL161772.1-201ENST00000610494 4412 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 POU5F1P6-201ENST00000466990 990 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 SLC25A6P2-201ENST00000497974 877 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AC091167.2-201ENST00000579581 588 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AC073347.1-201ENST00000421633 2643 ntBASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NICN1Q9BSH3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 AC112504.1-201ENST00000623415 1841 ntBASIC14.11□□□□□ -0.15
NICN1Q9BSH3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 FOSL1P1-201ENST00000511041 816 ntBASIC14.11□□□□□ -0.15
NICN1Q9BSH3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.11□□□□□ -0.15
NICN1Q9BSH3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms