Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 PCDHB19P-201ENST00000570871 2371 ntBASIC17.3■□□□□ 0.36
GCNAQ96QF7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AL353705.2-201ENST00000428243 662 ntBASIC17.3■□□□□ 0.36
GCNAQ96QF7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AP3S2-216ENST00000617003 1561 ntBASIC17.3■□□□□ 0.36
GCNAQ96QF7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.3■□□□□ 0.36
GCNAQ96QF7 AC092068.3-201ENST00000587894 2016 ntBASIC17.3■□□□□ 0.36
GCNAQ96QF7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GCNAQ96QF7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 AL391005.1-201ENST00000623953 2435 ntBASIC17.29■□□□□ 0.36
GCNAQ96QF7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TERF1P3-201ENST00000505638 1227 ntBASIC17.29■□□□□ 0.36
GCNAQ96QF7 AC138761.1-201ENST00000584393 385 ntBASIC17.29■□□□□ 0.36
GCNAQ96QF7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 AC073592.8-201ENST00000624126 511 ntBASIC17.29■□□□□ 0.36
GCNAQ96QF7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.29■□□□□ 0.36
GCNAQ96QF7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GCNAQ96QF7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GCNAQ96QF7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.28■□□□□ 0.36
GCNAQ96QF7 COX20P2-201ENST00000452636 358 ntBASIC17.28■□□□□ 0.36
GCNAQ96QF7 AC097493.3-201ENST00000509725 367 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms