Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 BASP1P1-201ENST00000430708 665 ntBASIC14.86□□□□□ -0.03
LRRC46Q96FV0 AC079140.1-201ENST00000508039 487 ntBASIC14.86□□□□□ -0.03
LRRC46Q96FV0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LRRC46Q96FV0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 AC109322.1-201ENST00000524499 1264 ntBASIC14.85□□□□□ -0.03
LRRC46Q96FV0 AC107918.2-201ENST00000530817 355 ntBASIC14.85□□□□□ -0.03
LRRC46Q96FV0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 AC091167.2-201ENST00000579581 588 ntBASIC14.85□□□□□ -0.03
LRRC46Q96FV0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 AC099522.2-201ENST00000607001 744 ntBASIC14.85□□□□□ -0.03
LRRC46Q96FV0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LRRC46Q96FV0 AC132872.4-202ENST00000622924 2756 ntBASIC14.85□□□□□ -0.03
LRRC46Q96FV0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 LINC00304-203ENST00000565008 1864 ntBASIC14.84□□□□□ -0.03
LRRC46Q96FV0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 LYSMD4-203ENST00000378904 2122 ntBASIC14.84□□□□□ -0.03
LRRC46Q96FV0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LRRC46Q96FV0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms