Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC087641.1-201ENST00000557561 1021 ntBASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CPNE2Q96FN4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.33□□□□□ -0.11
CPNE2Q96FN4 AC144831.1-201ENST00000573312 2656 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 MIR4492-201ENST00000581627 80 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 MTDHP4-201ENST00000600287 670 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 AC008608.2-201ENST00000606089 416 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 AC020765.3-201ENST00000613051 740 ntBASIC14.33□□□□□ -0.12
CPNE2Q96FN4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE2Q96FN4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 PCDHA3-202ENST00000532566 4594 ntBASIC14.32□□□□□ -0.12
CPNE2Q96FN4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE2Q96FN4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms