Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AL138831.2-201ENST00000606564 490 ntBASIC12.31□□□□□ -0.44
NUP35Q8NFH5 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NUP35Q8NFH5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 LINC00528-201ENST00000600723 2160 ntBASIC12.3□□□□□ -0.44
NUP35Q8NFH5 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 KRT8P39-201ENST00000396270 1433 ntBASIC12.3□□□□□ -0.44
NUP35Q8NFH5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TSPY20P-201ENST00000450910 630 ntBASIC12.3□□□□□ -0.44
NUP35Q8NFH5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
NUP35Q8NFH5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 AC007191.1-201ENST00000623179 2995 ntBASIC12.29□□□□□ -0.44
NUP35Q8NFH5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NUP35Q8NFH5 GPAA1P2-202ENST00000606848 1787 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms