Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 CSF2RBP1-201ENST00000447905 391 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 FAM86LP-201ENST00000478302 853 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 RNA5SP412-201ENST00000516234 123 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 TDH-203ENST00000531764 1110 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 AC084346.2-201ENST00000607097 949 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 GPR182-203ENST00000622922 591 ntBASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
KLHDC9Q8NEP7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KLHDC9Q8NEP7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 KRT8P37-201ENST00000451609 1420 ntBASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KLHDC9Q8NEP7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 TARDBPP1-201ENST00000442013 1203 ntBASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 FO681548.1-201ENST00000455617 1132 ntBASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 ENPP7P5-201ENST00000541031 1031 ntBASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KLHDC9Q8NEP7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 KRT8P44-201ENST00000441609 1350 ntBASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KLHDC9Q8NEP7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms