Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AC009078.2-202ENST00000463353 338 ntBASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AC145285.3-201ENST00000564603 959 ntBASIC15.06■□□□□ 0
LSMEM1Q8N8F7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AC007064.4-201ENST00000637740 555 ntBASIC15.06■□□□□ 0
LSMEM1Q8N8F7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 AL592424.1-201ENST00000563624 1536 ntBASIC15.06■□□□□ 0
LSMEM1Q8N8F7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
LSMEM1Q8N8F7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
LSMEM1Q8N8F7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC010507.1-201ENST00000633895 436 ntBASIC15.05■□□□□ -0
LSMEM1Q8N8F7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC005622.1-201ENST00000636801 1703 ntBASIC15.05■□□□□ -0
LSMEM1Q8N8F7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
LSMEM1Q8N8F7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
LSMEM1Q8N8F7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms