Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AL035456.1-201ENST00000456064 1369 ntBASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AL353705.2-201ENST00000428243 662 ntBASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AL158211.3-201ENST00000607385 239 ntBASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AC003101.2-201ENST00000612557 442 ntBASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ARHGEF39Q8N4T4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
ARHGEF39Q8N4T4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 AC245100.5-201ENST00000452108 331 ntBASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 RN7SL828P-201ENST00000607615 303 ntBASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 MTHFR-217ENST00000641820 1569 ntBASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ARHGEF39Q8N4T4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ARHGEF39Q8N4T4 FO538757.1-201ENST00000623083 1397 ntBASIC15.38■□□□□ 0.05
ARHGEF39Q8N4T4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ARHGEF39Q8N4T4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
ARHGEF39Q8N4T4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms