Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC018529.1-201ENST00000613063 361 ntBASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS52Q8N1B4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AC004890.2-204ENST00000481968 304 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AC105233.2-201ENST00000523697 349 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AF228730.5-201ENST00000530288 346 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 RARRES2P9-201ENST00000565168 469 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AC003101.2-201ENST00000612557 442 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AC073592.8-201ENST00000624126 511 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 AP3S2-216ENST00000617003 1561 ntBASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
VPS52Q8N1B4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 LINC00895-201ENST00000629028 1637 ntBASIC17.77■□□□□ 0.44
VPS52Q8N1B4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
VPS52Q8N1B4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
VPS52Q8N1B4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.76■□□□□ 0.43
VPS52Q8N1B4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms