Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 AC079776.4-201ENST00000511039 504 ntBASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 MTDHP3-201ENST00000594186 672 ntBASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 AL355877.3-201ENST00000622820 899 ntBASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CRLF3Q8IUI8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CRLF3Q8IUI8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 AC022532.1-201ENST00000624563 1728 ntBASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 RBM17P3-201ENST00000417687 1192 ntBASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 FGFR3P6-201ENST00000457012 610 ntBASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.45■□□□□ 0.22
CRLF3Q8IUI8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 AC243591.1-201ENST00000452967 1364 ntBASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.44■□□□□ 0.22
CRLF3Q8IUI8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms