Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF135Q8IUD6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 NKILA-202ENST00000614771 2598 ntBASIC17.37■□□□□ 0.37
RNF135Q8IUD6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AP3S2-216ENST00000617003 1561 ntBASIC17.37■□□□□ 0.37
RNF135Q8IUD6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AL033527.4-201ENST00000641026 673 ntBASIC17.37■□□□□ 0.37
RNF135Q8IUD6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 AC087499.5-201ENST00000452760 1342 ntBASIC17.37■□□□□ 0.37
RNF135Q8IUD6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.37■□□□□ 0.37
RNF135Q8IUD6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF135Q8IUD6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 DFFBP1-201ENST00000433250 979 ntBASIC17.36■□□□□ 0.37
RNF135Q8IUD6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 GNAQP1-201ENST00000444815 1067 ntBASIC17.36■□□□□ 0.37
RNF135Q8IUD6 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 FAM8A2P-201ENST00000528813 1142 ntBASIC17.36■□□□□ 0.37
RNF135Q8IUD6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 AC004840.1-201ENST00000636359 365 ntBASIC17.36■□□□□ 0.37
RNF135Q8IUD6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RNF135Q8IUD6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AC087499.6-201ENST00000411576 835 ntBASIC17.35■□□□□ 0.37
RNF135Q8IUD6 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms