Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP50Q70EL3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP50Q70EL3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.03■□□□□ 0.64
USP50Q70EL3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
USP50Q70EL3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
USP50Q70EL3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.02■□□□□ 0.64
USP50Q70EL3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.02■□□□□ 0.64
USP50Q70EL3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
USP50Q70EL3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.02■□□□□ 0.64
USP50Q70EL3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
USP50Q70EL3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
USP50Q70EL3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 ACKR1-201ENST00000368121 1240 ntBASIC19.02■□□□□ 0.64
USP50Q70EL3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 BTBD6P1-201ENST00000412176 1267 ntBASIC19.02■□□□□ 0.64
USP50Q70EL3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.02■□□□□ 0.64
USP50Q70EL3 SCARNA20.5-201ENST00000516991 142 ntBASIC19.02■□□□□ 0.64
USP50Q70EL3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.02■□□□□ 0.64
USP50Q70EL3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.02■□□□□ 0.64
USP50Q70EL3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.02■□□□□ 0.64
USP50Q70EL3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC19.02■□□□□ 0.64
USP50Q70EL3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.02■□□□□ 0.64
USP50Q70EL3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
USP50Q70EL3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
USP50Q70EL3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP50Q70EL3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP50Q70EL3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP50Q70EL3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
USP50Q70EL3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP50Q70EL3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
USP50Q70EL3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
USP50Q70EL3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 AL645728.1-201ENST00000366221 2101 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 AC006001.1-201ENST00000325130 474 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.01■□□□□ 0.63
USP50Q70EL3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 AL662890.1-201ENST00000396818 632 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 AC004898.1-201ENST00000451057 766 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.01■□□□□ 0.63
USP50Q70EL3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 AC022137.2-201ENST00000503482 481 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.01■□□□□ 0.63
USP50Q70EL3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.01■□□□□ 0.63
USP50Q70EL3 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.01■□□□□ 0.63
USP50Q70EL3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP50Q70EL3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
USP50Q70EL3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.01■□□□□ 0.63
USP50Q70EL3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 PCGF3-213ENST00000620529 1899 ntBASIC19.01■□□□□ 0.63
USP50Q70EL3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
USP50Q70EL3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
USP50Q70EL3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
USP50Q70EL3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
USP50Q70EL3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19■□□□□ 0.63
USP50Q70EL3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19■□□□□ 0.63
USP50Q70EL3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19■□□□□ 0.63
USP50Q70EL3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
USP50Q70EL3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms