Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.13■□□□□ 0.33
RFWD3Q6PCD5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 AC109322.1-201ENST00000524499 1264 ntBASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 AC027307.2-201ENST00000591252 911 ntBASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 AL139011.1-202ENST00000642063 584 ntBASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFWD3Q6PCD5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 KRT18P32-201ENST00000424695 1287 ntBASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 KRT18P34-201ENST00000488218 1270 ntBASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 PAUPAR-201ENST00000630360 2965 ntBASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RFWD3Q6PCD5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.1■□□□□ 0.33
RFWD3Q6PCD5 AC004449.1-201ENST00000564240 433 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms