Protein–RNA interactions for Protein: Q5J8X5

MS4A13, Membrane-spanning 4-domains subfamily A member 13, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A13Q5J8X5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MS4A13Q5J8X5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 MIR4321-201ENST00000592276 80 ntBASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MS4A13Q5J8X5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 MIR770-201ENST00000390219 98 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 MIR943-201ENST00000401286 94 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 BANF1P1-201ENST00000553684 263 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AC005498.2-205ENST00000593218 784 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AL390955.2-201ENST00000603032 514 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AL118508.1-201ENST00000613502 2345 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 AC006449.6-201ENST00000612330 2296 ntBASIC16.79■□□□□ 0.28
MS4A13Q5J8X5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 AC069120.2-201ENST00000524091 540 ntBASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A13Q5J8X5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms