Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATP6AP1LQ52LC2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 RPS2P1-201ENST00000434010 821 ntBASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATP6AP1LQ52LC2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 LINC02447-202ENST00000501888 2146 ntBASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AC012569.1-201ENST00000591191 1524 ntBASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AC126755.1-201ENST00000525846 6405 ntBASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CDC14C-201ENST00000428251 1719 ntBASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 DUSP5P1-201ENST00000441325 1139 ntBASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.89■□□□□ 0.13
ATP6AP1LQ52LC2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms