Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 AC007967.3-201ENST00000434308 558 ntBASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PRYP5-201ENST00000451909 266 ntBASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 HLA-J-203ENST00000494367 1087 ntBASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 GPR89P-201ENST00000407924 1495 ntBASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CHRFAM7AQ494W8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 TSEN15P1-201ENST00000423257 515 ntBASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 AC103564.2-201ENST00000432853 1299 ntBASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 VN2R19P-201ENST00000442399 1052 ntBASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 AL589182.2-201ENST00000619332 1049 ntBASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 PMPCAP1-201ENST00000508114 1576 ntBASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CHRFAM7AQ494W8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CHRFAM7AQ494W8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms